Alignment of alleles: Common carp (Cyprinus carpio) IGIV1S1

When several alleles are shown, the nucleotide mutations and amino acid changes for a given codon are indicated in red letters. These polymorphic mutations are reported in Tables of alleles.
Dashes indicate identical nucleotides. Dots indicate gaps according to the IMGT unique numbering. Blanks indicate partial sequences (blanks at the 5' and/or 3' end).

                                  1   2   3   4   5   6   7   8   9  10  11  12  13  14  15  16  17  18  19  20
                                                             P   S   V   A   A   V   Q   P   G   E   T   V   T
  AB015897,IGIV1S1*01                                       CCC TCA GTA GCA GCT GTT CAA CCA GGA GAA ACA GTT ACT

                                                        ___________________CDR1-IMGT_______________________
                                 21  22  23  24  25  26  27  28  29  30  31  32 32A  33  34  35  36  37  38  39  40
                                 I   N   C   Q   T   S   R   G   I   G   D   Q   S   R   G   C   G   S   C   L   T
  AB015897,IGIV1S1*01           ATA AAC TGT CAA ACT AGC AGA GGA ATT GGA GAT CAA TCA CGG GGT TGT GGT TCC TGT CTC ACC

                                                                                            _____________CDR2-IM
                                 41  42  43  44  45  46  47  48  49  50  51  52  53  54  55  56  57  58  59  60
                                 W   Y   L   Q   K   P   G   E   A   P   K   L   L   I   Y   Y   I   R
  AB015897,IGIV1S1*01           TGG TAT CTG CAG AAA CCT GGA GAA GCT CCT AAA CTC CTC ATT TAT TAC ATT AGA ... ...

                                GT__________________
                                 61  62  63  64  65  66  67  68  69  70  71  72  73  74  75  76  77  78  79  80
                                                     S   R   Q   S   G   T   S       S   R   F   S   G   N   G
  AB015897,IGIV1S1*01           ... ... ... ... ... TCA AGA CAG TCA GGA ACT TCA ... TCT AGA TTC AGT GGC AAT GGA


                                 81  82  83  84  85  86  87  88  89  90  91  92  93  94  95  96  97  98  99 100
                                 A   N   Y   G   T   D   F   T   L   T   I   S   G   V   Q   T   E   D   A   G
  AB015897,IGIV1S1*01           GCA AAT TAT GGA ACA GAT TTC ACT CTG ACC ATC AGT GGA GTC CAG ACT GAA GAT GCT GGA

                                                _____________CDR3-IMGT__________________
                                101 102 103 104 105 106 107 108 109 110 111 112 113 114
                                 H   Y   Y   C   Q   S   A   H   Y   I   S   S   S   W
  AB015897,IGIV1S1*01           CAT TAT TAC TGT CAG AGT GCT CAC TAT ATC AGT AGT AGC TGG  #c
#c: rearranged cDNA

This alignment has been generated with the IMGT/AlleleAlign tool developed by Mehdi Yousfi (31/07/2001)

Created: 15/04/2003
Author: Nathalie Bosc